Package: BoomSpikeSlab 1.2.6
BoomSpikeSlab: MCMC for Spike and Slab Regression
Spike and slab regression with a variety of residual error distributions corresponding to Gaussian, Student T, probit, logit, SVM, and a few others. Spike and slab regression is Bayesian regression with prior distributions containing a point mass at zero. The posterior updates the amount of mass on this point, leading to a posterior distribution that is actually sparse, in the sense that if you sample from it many coefficients are actually zeros. Sampling from this posterior distribution is an elegant way to handle Bayesian variable selection and model averaging. See <doi:10.1504/IJMMNO.2014.059942> for an explanation of the Gaussian case.
Authors:
BoomSpikeSlab_1.2.6.tar.gz
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BoomSpikeSlab.pdf |BoomSpikeSlab.html✨
BoomSpikeSlab/json (API)
# Install 'BoomSpikeSlab' in R: |
install.packages('BoomSpikeSlab', repos = c('https://steve-the-bayesian.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 1 years agofrom:b9e3dcf309. Checks:8 OK, 4 NOTE. Indexed: yes.
Target | Result | Latest binary |
---|---|---|
Doc / Vignettes | OK | Apr 01 2025 |
R-4.5-win-x86_64 | NOTE | Apr 01 2025 |
R-4.5-mac-x86_64 | NOTE | Apr 01 2025 |
R-4.5-mac-aarch64 | NOTE | Apr 01 2025 |
R-4.5-linux-x86_64 | NOTE | Apr 01 2025 |
R-4.4-win-x86_64 | OK | Apr 01 2025 |
R-4.4-mac-x86_64 | OK | Apr 01 2025 |
R-4.4-mac-aarch64 | OK | Apr 01 2025 |
R-4.4-linux-x86_64 | OK | Apr 01 2025 |
R-4.3-win-x86_64 | OK | Apr 01 2025 |
R-4.3-mac-x86_64 | OK | Apr 01 2025 |
R-4.3-mac-aarch64 | OK | Apr 01 2025 |
Exports:BayesNnetBsplineBasisCoefficientGroupConditionalZellnerPriorGetPredictorMatrixHiddenLayerIndependentSpikeSlabPriorIsplineBasisknotslm.spikelogit.spikeLogitZellnerPriormlm.spikemodel.matrix.glm.spikeMsplineBasisMultinomialLogitSpikeSlabPriorNestedRegressionOdaOptionsPartialDependencePlotplot.lm.spikeplot.logit.spikeplot.poisson.spikeplot.qreg.spikePlotBayesNnetPredictionsPlotBayesNnetResidualsPlotLmSpikeCoefficientsPlotLmSpikeFitPlotLmSpikeResidualsPlotLogitSpikeFitSummaryPlotLogitSpikeResidualsPlotMarginalInclusionProbabilitiesPlotModelSizePlotNetworkStructurePlotProbitSpikeResidualspoisson.spikePoissonZellnerPriorpredict.BayesNnetpredict.lm.spikepredict.logit.spikepredict.poisson.spikepredict.probit.spikepredict.qreg.spikeprobit.spikeqreg.spikeresiduals.lm.spikeShrinkageRegressionSpikeSlabGlmPriorSpikeSlabGlmPriorDirectSpikeSlabPriorSpikeSlabPriorBaseSpikeSlabPriorDirectSsvsOptionsStudentIndependentSpikeSlabPriorStudentSpikeSlabPriorSuggestBurnSummarizeSpikeSlabCoefficientssummary.lm.spikesummary.logit.spikesummary.probit.spike